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  • Top cofit genes for PP_2336 from Pseudomonas putida KT2440

    aconitate hydratase 1
    SEED: 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
    KEGG: aconitate hydratase 1

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2337 aconitate isomerase 0.98 0.72
    2 PP_0393 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 0.59 0.47
    3 PP_2334 2-methylisocitrate lyase 0.95 0.45
    4 PP_3248 Dyp-type peroxidase family protein no 0.44
    5 PP_1994 tRNA pseudouridine (38-40)synthase 0.57 0.44
    6 PP_4124 NADH-quinone oxidoreductase subunit G 0.87 0.44
    7 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.88 0.44
    8 PP_1353 conserved membrane protein of unknown function 0.72 0.44
    9 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 0.89 0.43
    10 PP_4120 NADH-quinone oxidoreductase subunit B 0.85 0.42
    11 PP_5310 junction-specific ATP-dependent DNA helicase no 0.41
    12 PP_2302 DNA-binding, ATP-dependent protease 0.83 0.41
    13 PP_4131 NADH-quinone oxidoreductase subunit N 0.89 0.40
    14 PP_4693 RNA polymerase-binding transcription factor DksA 0.65 0.39
    15 PP_4799 putative Muramoyltetrapeptide carboxypeptidase no 0.39
    16 PP_1783 dTDP-glucose pyrophosphorylase 0.52 0.39
    17 PP_2333 GntR family transcriptional regulator 0.70 0.39
    18 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.38
    19 PP_2335 methylcitrate synthase 0.92 0.38
    20 PP_1629 Protein RecA no 0.38

    Or look for negative cofitness