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  • Top cofit genes for PP_2333 from Pseudomonas putida KT2440

    GntR family transcriptional regulator
    SEED: Propionate catabolism operon transcriptional regulator of GntR family [predicted]

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2334 2-methylisocitrate lyase 0.84 0.60
    2 PP_2335 methylcitrate synthase 0.85 0.59
    3 PP_3754 Beta-ketothiolase BktB no 0.54
    4 PP_3753 Transcriptional regulator, AraC family no 0.50
    5 PP_4628 conserved protein of unknown function 0.73 0.50
    6 PP_2791 4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data) no 0.44
    7 PP_2790 Sigma-54 dependent sensory box protein no 0.44
    8 PP_2794 Oxidoreductase, short chain dehydrogenase/reductase family no 0.41
    9 PP_2337 aconitate isomerase 0.71 0.41
    10 PP_2336 aconitate hydratase 1 0.70 0.39
    11 PP_3286 DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) no 0.34
    12 PP_3755 3-hydroxybutyryl-CoA dehydrogenase no 0.33
    13 PP_2793 Acyl-CoA dehydrogenase family protein no 0.31
    14 PP_2213 putative acyl-CoA synthetase 0.29 0.30
    15 PP_3925 conserved protein of unknown function no 0.28
    16 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.21 0.27
    17 PP_2211 Transcriptional regulator, AraC family 0.41 0.26
    18 PP_2217 enoyl-CoA hydratase 0.44 0.24
    19 PP_2216 short-chain acyl-CoA dehydrogenase 0.49 0.23
    20 PP_4993 Glutathione synthetase 0.56 0.23

    Or look for negative cofitness