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  • Top cofit genes for PP_2256 from Pseudomonas putida KT2440

    Transcriptional regulator, Cro/CI family
    SEED: Transcriptional regulator, Cro/CI family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2257 putative aerotaxis receptor no 0.24
    2 PP_1644 NAD(P)H dehydrogenase (quinone) no 0.20
    3 PP_0506 putative ABC efflux transporter, permease protein no 0.19
    4 PP_3371 Sensor histidine kinase no 0.18
    5 PP_2513 4-oxalomesaconate tautomerase no 0.18
    6 PP_5261 Transcriptional regulator, LysR family no 0.17
    7 PP_1662 conserved protein of unknown function no 0.17
    8 PP_2751 conserved exported protein of unknown function no 0.17
    9 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) no 0.17
    10 PP_1301 quality control serine endoprotease DegS 0.49 0.17
    11 PP_2714 Sensor histidine kinase no 0.17
    12 PP_0488 putative NADP-dependent dehydrogenase HI_1430 no 0.16
    13 PP_3244 Magnesium transporter, MgtC family no 0.16
    14 PP_2255 C4-dicarboxylate transport protein no 0.16
    15 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.16
    16 PP_3525 conserved exported protein of unknown function no 0.16
    17 PP_3790 diaminopimelate epimerase no 0.15
    18 PP_2173 Transcriptional regulator, AraC family no 0.15
    19 PP_0570 lipoprotein of unknown function no 0.15
    20 PP_5648 conserved exported protein of unknown function no 0.15

    Or look for negative cofitness