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  • Top cofit genes for PP_2255 from Pseudomonas putida KT2440

    C4-dicarboxylate transport protein
    SEED: probable dicarboxylate transporter
    KEGG: aerobic C4-dicarboxylate transport protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5348 Transcriptional regulator, LysR family 0.75 0.22
    2 PP_3417 D-gluconate transporter 0.72 0.22
    3 PP_2328 Phosphoadenosine phosphosulfate reductase no 0.22
    4 PP_3999 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase 0.81 0.22
    5 PP_5463 conserved protein of unknown function no 0.22
    6 PP_0362 Biotin synthase no 0.21
    7 PP_1986 3-isopropylmalate dehydratase small subunit 0.74 0.21
    8 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) no 0.21
    9 PP_0570 lipoprotein of unknown function no 0.21
    10 PP_5098 methionine biosynthesis protein MetW 0.76 0.21
    11 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 0.76 0.21
    12 PP_5623 conserved membrane protein of unknown function no 0.21
    13 PP_1988 3-isopropylmalate dehydrogenase 0.73 0.20
    14 PP_5346 pyruvate carboxylase subunit B 0.76 0.20
    15 PP_1231 quinolinate synthase [4Fe-4S] cluster subunit no 0.20
    16 PP_0144 Metalloprotease, insulinase family no 0.20
    17 PP_0082 tryptophan synthase alpha chain 0.76 0.20
    18 PP_4678 Ketol-acid reductoisomerase no 0.20
    19 PP_0364 pimeloyl-[acp] methyl ester esterase no 0.20
    20 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.73 0.20

    Or look for negative cofitness