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  • Top cofit genes for PP_2238 from Pseudomonas putida KT2440

    putative metallopeptidase
    SEED: Xaa-Pro aminopeptidase (EC 3.4.11.9)
    KEGG: Xaa-Pro aminopeptidase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3761 Sensor histidine kinase/response regulator 0.52 0.32
    2 PP_4959 diguanylate cyclase no 0.28
    3 PP_4545 beta-ketodecanoyl-(Acyl-carrier-protein) synthase 0.36 0.23
    4 PP_0413 Polyamine ABC transporter, permease protein 0.59 0.22
    5 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.74 0.21
    6 PP_0691 Glutamate 5-kinase no 0.20
    7 PP_4519 Agglutination protein 0.32 0.19
    8 PP_0743 conserved protein with NAD(P)-binding Rossmann-fold domain no 0.19
    9 PP_0166 HlyD family secretion protein 0.37 0.19
    10 PP_5717 conserved protein of unknown function no 0.19
    11 PP_0167 Toxin secretion ATP-binding protein 0.55 0.19
    12 PP_4342 flagellar synthesis regulator, putative ATPase 0.32 0.18
    13 PP_0168 putative surface adhesion protein no 0.18
    14 PP_4723 Carbamoyl-phosphate synthase large chain no 0.18
    15 PP_0850 Dual-specificity RNA methyltransferase RlmN 0.41 0.18
    16 PP_3711 diguanylate cyclase no 0.18
    17 PP_4363 Sensor histidine kinase/response regulator 0.47 0.18
    18 PP_4143 conserved protein of unknown function 0.30 0.18
    19 PP_0002 probable chromosome partition protein 0.69 0.18
    20 PP_0693 conserved protein of unknown function no 0.18

    Or look for negative cofitness