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  • Top cofit genes for PP_2199 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: AFG1-like ATPase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1875 Sensor histidine kinase/response regulator no 0.17
    2 PP_0355 Response regulator 0.34 0.17
    3 PP_3620 cofactor of beta-methylthiolation of ribosomal protein S12 no 0.16
    4 PP_1437 Heavy metal sensor histidine kinase no 0.15
    5 PP_4005 Leucyl/phenylalanyl-tRNA--protein transferase no 0.15
    6 PP_2387 conserved protein of unknown function no 0.15
    7 PP_0994 putative RNA polymerase sigma factor no 0.15
    8 PP_2038 long-chain-fatty-acid--CoA ligase 0.45 0.15
    9 PP_4041 putative glycoside hydrolase no 0.15
    10 PP_5143 conserved membrane protein of unknown function 0.33 0.15
    11 PP_0094 5'-nucleotidase no 0.14
    12 PP_0250 heat shock protein Hsp15 involved in ribosome recycling no 0.14
    13 PP_2040 Major facilitator family transporter no 0.14
    14 PP_5608 putative exported protein no 0.14
    15 PP_4786 conserved protein of unknown function no 0.14
    16 PP_4574 conserved protein of unknown function no 0.14
    17 PP_4171 conserved exported protein of unknown function no 0.13
    18 PP_1302 putative metal-binding hydrolase-oxidase enzyme 0.37 0.13
    19 PP_3342 nickel ABC transporter periplasmic binding protein no 0.13
    20 PP_3734 putative ABC transporter, permease protein 0.33 0.13

    Or look for negative cofitness