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  • Top cofit genes for PP_2192 from Pseudomonas putida KT2440

    putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein
    SEED: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0491 formate dehydrogenase-O, gamma subunit no 0.21
    2 PP_3044 Phage portal protein, lambda family no 0.20
    3 PP_5118 putative 3-mercaptopyruvate sulfurtransferase no 0.19
    4 PP_4181 conserved protein of unknown function no 0.18
    5 PP_2069 putative Multidrug efflux MFS outer membrane protein no 0.17
    6 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit no 0.17
    7 PP_5502 ribosome modulation factor no 0.17
    8 PP_2293 DNA maturase B no 0.16
    9 PP_0163 putative transcriptional regulator no 0.16
    10 PP_0913 conserved exported protein of unknown function no 0.16
    11 PP_1927 putative Arsenical resistance protein ArsH no 0.16
    12 PP_3209 Isoxanthopterin deaminase no 0.16
    13 PP_2077 diaminopimelate decarboxylase no 0.16
    14 PP_2744 Ribose-phosphate pyrophosphokinase family protein no 0.16
    15 PP_4594 putative Cystathionine gamma-synthase no 0.16
    16 PP_4211 outer membrane pyoverdine efflux protein no 0.16
    17 PP_4011 isocitrate dehydrogenase, NADP(+)-specific no 0.16
    18 PP_3773 conserved protein of unknown function no 0.15
    19 PP_4262 Cytochrome oxidase maturation protein, cbb3-type no 0.15
    20 PP_3315 conserved membrane protein of unknown function no 0.15

    Or look for negative cofitness