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  • Top cofit genes for PP_2188 from Pseudomonas putida KT2440

    putative tRNA-(Ms(2)io(6)a)-hydroxylase
    SEED: tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-)
    KEGG: tRNA-(ms[2]io[6]A)-hydroxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4723 Carbamoyl-phosphate synthase large chain 0.48 0.18
    2 PP_2649 Transcriptional regulator, LysR family no 0.16
    3 PP_2996 conserved protein of unknown function no 0.16
    4 PP_4724 Carbamoyl-phosphate synthase small chain 0.48 0.15
    5 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.15
    6 PP_0190 putative disulfide bond formation protein B 0.42 0.15
    7 PP_0662 putative Threonine synthase no 0.14
    8 PP_1824 Smr domain protein no 0.14
    9 PP_4671 conserved exported protein of unknown function 0.35 0.14
    10 PP_2261 Sugar ABC transporter, ATP-binding protein no 0.14
    11 PP_1298 putative amino acid ABC transporter - permease subunit no 0.13
    12 PP_0837 putative regulator of flagellation no 0.13
    13 PP_3941 maleamate amidohydrolase no 0.13
    14 PP_4968 DNA ligase B 0.29 0.13
    15 PP_1794 conserved hypothetical protein no 0.13
    16 PP_3044 Phage portal protein, lambda family no 0.13
    17 PP_4999 dihydroorotase-like protein no 0.13
    18 PP_4180 conserved protein of unknown function no 0.13
    19 PP_2849 urease accessory protein no 0.13
    20 PP_5743 putative TonB-dependent receptor protein no 0.13

    Or look for negative cofitness