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  • Top cofit genes for PP_2186 from Pseudomonas putida KT2440

    putative Formate dehydrogenase, delta subunit
    SEED: NAD-dependent formate dehydrogenase delta subunit
    KEGG: formate dehydrogenase, delta subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2210 LysR family transcriptional regulator no 0.17
    2 PP_0830 Acetyltransferase, GNAT family no 0.17
    3 PP_0593 putative ribosome-binding factor 0.47 0.17
    4 PP_2025 Exonuclease SbcD no 0.16
    5 PP_1392 putative NAD-binding protein no 0.16
    6 PP_2064 Multidrug efflux RND membrane fusion protein no 0.16
    7 PP_0584 Methyl-accepting chemotaxis transducer no 0.16
    8 PP_5265 Xanthine phosphoribosyltransferase no 0.16
    9 PP_4968 DNA ligase B no 0.15
    10 PP_2933 GSH-dependent disulfide bond oxidoreductase no 0.15
    11 PP_2003 conserved protein of unknown function no 0.15
    12 PP_2556 Chromate transporter no 0.15
    13 PP_2043 conserved exported protein of unknown function no 0.15
    14 PP_0021 conserved hypothetical protein no 0.15
    15 PP_2573 conserved protein of unknown function no 0.15
    16 PP_0994 putative RNA polymerase sigma factor no 0.15
    17 PP_0798 GGDEF domain protein no 0.14
    18 PP_0992 conserved protein of unknown function, UPF0276 family no 0.14
    19 PP_0848 donor of Fe2+ and regulator of cysteine desulfurase activity no 0.14
    20 PP_3724 putative Acyl-CoA synthetase no 0.14

    Or look for negative cofitness