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  • Top cofit genes for PP_2185 from Pseudomonas putida KT2440

    putative Formate dehydrogenase, alpha subunit
    SEED: NAD-dependent formate dehydrogenase alpha subunit
    KEGG: formate dehydrogenase, alpha subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0524 putative Periplasmic cobalamin-binding protein HutB 0.35 0.18
    2 PP_2184 putative Formate dehydrogenase, beta subunit 0.99 0.18
    3 PP_1526 putative Beta-(1-3)-glucosyl transferase no 0.17
    4 PP_3095 Protein ClpV1 no 0.17
    5 PP_0257 protein sulfur transferase 0.97 0.17
    6 PP_2546 conserved membrane protein of unknown function no 0.16
    7 PP_3349 3-hydroxyphenylpropionate / 3-hydroxycinnamate:H+ symporter no 0.16
    8 PP_1550 Transcriptional regulator, Cro/CI family no 0.16
    9 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase no 0.15
    10 PP_4281 guanine deaminase 0.22 0.15
    11 PP_4503 DNA-binding response regulator no 0.15
    12 PP_0218 Sensory box protein 0.26 0.15
    13 PP_2840 putative Membrane protein 0.57 0.15
    14 PP_5606 conserved exported protein of unknown function with YVTN beta-propeller repeat no 0.15
    15 PP_1873 Peptide methionine sulfoxide reductase MsrB no 0.15
    16 PP_2784 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.14
    17 PP_5176 conserved protein of unknown function no 0.14
    18 PP_0673 conserved protein of unknown function no 0.14
    19 PP_2645 magnesium transporter, ATP-dependent 0.21 0.14
    20 PP_3471 conserved protein of unknown function no 0.14

    Or look for negative cofitness