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  • Top cofit genes for PP_2177 from Pseudomonas putida KT2440

    putative transcriptional regulator
    SEED: Transcriptional regulator, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1552 putative Phage replication protein no 0.18
    2 PP_2178 glutamate-putrescine ligase no 0.18
    3 PP_5598 conserved protein of unknown function no 0.18
    4 PP_4225 two component system DNA-binding transcriptional activator QseB no 0.17
    5 PP_1879 conserved protein of unknown function no 0.17
    6 PP_5181 spermidine/putrescine ABC transporter - periplasmic subunit no 0.17
    7 PP_1882 conserved membrane protein of unknown function no 0.17
    8 PP_2184 putative Formate dehydrogenase, beta subunit no 0.17
    9 PP_3947 nicotinate dehydrogenase subunit A no 0.17
    10 PP_5503 putative CheA signal transduction histidine kinase no 0.16
    11 PP_2021 L-alpha-hydroxyglutaric acid gamma-lactonase no 0.16
    12 PP_0669 Outer membrane ferric siderophore receptor no 0.16
    13 PP_4710 tRNA pseudouridine 55 synthase no 0.16
    14 PP_2034 conserved membrane protein of unknown function no 0.16
    15 PP_5186 acetylornithine deacetylase no 0.16
    16 PP_3287 transcriptional regulator with 4Fe-4S cluster; Crp/Fnr family no 0.15
    17 PP_4138 Chromate reductase no 0.15
    18 PP_5179 spermidine/putrescine ABC transporter - ATP binding subunit no 0.15
    19 PP_3342 nickel ABC transporter periplasmic binding protein no 0.15
    20 PP_5314 Rubredoxin-NAD(+) reductase no 0.15

    Or look for negative cofitness