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  • Top cofit genes for PP_2173 from Pseudomonas putida KT2440

    Transcriptional regulator, AraC family
    SEED: transcriptional regulator, AraC family
    KEGG: AraC family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding 0.35 0.28
    2 PP_3788 putative Non-ribosomal peptide synthetase no 0.27
    3 PP_0506 putative ABC efflux transporter, permease protein no 0.25
    4 PP_2714 Sensor histidine kinase no 0.24
    5 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase no 0.24
    6 PP_3790 diaminopimelate epimerase no 0.23
    7 PP_3786 aminotransferase no 0.23
    8 PP_3244 Magnesium transporter, MgtC family no 0.22
    9 PP_3787 conserved protein of unknown function no 0.21
    10 PP_1426 L-aspartate oxidase no 0.21
    11 PP_4684 conserved protein of unknown function with kinase-like domain 0.24 0.21
    12 PP_4922 Phosphomethylpyrimidine synthase no 0.21
    13 PP_1011 glucokinase no 0.21
    14 PP_3348 GGDEF domain protein no 0.20
    15 PP_2640 Acetyltransferase, GNAT family no 0.20
    16 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase no 0.20
    17 PP_5104 thiazole synthase no 0.20
    18 PP_0261 adenosine-3'(2'),5'-bisphosphate nucleotidase no 0.19
    19 PP_0570 lipoprotein of unknown function no 0.19
    20 PP_3376 putative phosphonate dehydrogenase no 0.19

    Or look for negative cofitness