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  • Top cofit genes for PP_2160 from Pseudomonas putida KT2440

    NADPH-dependent 7-cyano-7-deazaguanine reductase
    SEED: NADPH dependent preQ0 reductase (EC 1.7.1.13)
    KEGG: 7-cyano-7-deazaguanine reductase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5338 aspartate ammonia-lyase 0.42 0.43
    2 PP_5337 LysR family transcriptional regulator 0.57 0.42
    3 PP_4722 Transcription elongation factor GreA 0.44 0.41
    4 PP_5294 Ribonuclease PH 0.67 0.40
    5 PP_4124 NADH-quinone oxidoreductase subunit G 0.43 0.40
    6 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.85 0.39
    7 PP_4546 ATP-dependent helicase HrpA 0.49 0.39
    8 PP_0123 DNA polymerase I, 5 0.83 0.39
    9 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.81 0.38
    10 PP_4131 NADH-quinone oxidoreductase subunit N 0.51 0.38
    11 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.37
    12 PP_4120 NADH-quinone oxidoreductase subunit B 0.47 0.36
    13 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.58 0.36
    14 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) 0.38 0.36
    15 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 0.49 0.36
    16 PP_4880 exoribonuclease R 0.77 0.35
    17 PP_1318 Cytochrome b 0.83 0.35
    18 PP_1226 pre-queuosine 0 synthase 0.94 0.35
    19 PP_4507 potassium transporter 0.34 0.34
    20 PP_1906 ribosomal large subunit pseudouridine synthase C 0.53 0.34

    Or look for negative cofitness