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  • Top cofit genes for PP_2148 from Pseudomonas putida KT2440

    transcription-repair coupling factor
    SEED: Transcription-repair coupling factor
    KEGG: transcription-repair coupling factor (superfamily II helicase)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1627 conserved protein of unknown function 0.71 0.87
    2 PP_1798 Outer membrane efflux protein no 0.85
    3 PP_0540 conserved inner membrane protein 0.98 0.84
    4 PP_3627 conserved protein of unknown function no 0.84
    5 PP_5283 periplasmic dipeptide transport protein no 0.82
    6 PP_1777 phosphomannomutase 0.79 0.79
    7 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.76 0.79
    8 PP_1774 conserved exported protein of unknown function no 0.78
    9 PP_1871 Protease HtpX 0.54 0.78
    10 PP_1663 conserved exported protein of unknown function 0.56 0.76
    11 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.76
    12 PP_1803 UDP-sugar epimerase 0.85 0.74
    13 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.66 0.74
    14 PP_5279 conserved protein of unknown function no 0.72
    15 PP_1797 HlyD family secretion protein 0.41 0.72
    16 PP_0405 conserved protein of unknown function 0.76 0.70
    17 PP_1204 putative Lipoprotein no 0.70
    18 PP_1800 Oxidoreductase Rmd 0.36 0.70
    19 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase 0.56 0.68
    20 PP_1801 Glycosyl transferase WbpY 0.40 0.68

    Or look for negative cofitness