Top cofit genes for PP_2146 from Pseudomonas putida KT2440

helicase SNF2/RAD54 family
SEED: COG0553: Superfamily II DNA/RNA helicases, SNF2 family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4171		conserved exported protein of unknown function	no	0.39
2	PP_0574		DNA-binding response regulator, LuxR family	no	0.36
3	PP_1113		Pyridoxal-phosphate dependent enzyme family protein	no	0.35
4	PP_1655		23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	no	0.32
5	PP_2148		transcription-repair coupling factor	no	0.31
6	PP_4629		Sensory box protein	no	0.30
7	PP_4100		Transcriptional regulator, Cro/CI family	no	0.30
8	PP_0804		Protein secretion ABC efflux system, permease and ATP-binding protein	no	0.30
9	PP_0806		putative Surface adhesion protein	no	0.29
10	PP_1871		Protease HtpX	0.31	0.28
11	PP_0803		Protein secretion ABC efflux system, membrane fusion protein	no	0.28
12	PP_0564		conserved protein of unknown function	no	0.28
13	PP_3831		conserved protein of unknown function	no	0.28
14	PP_1656		ATP:GTP 3'-pyrophosphotransferase	no	0.28
15	PP_0719		ribosome-associated potassium-dependent informational ATP/GTPase	no	0.27
16	PP_1650		Sensor protein GacS	no	0.27
17	PP_4099		two-componenent system BarA/UvrY - regulatory subunit	no	0.27
18	PP_0805		Outer membrane efflux protein	no	0.27
19	PP_5146		RNA pyrophosphohydrolase	no	0.27
20	PP_2889		putative Transmembrane regulator PrtR	no	0.26

Or look for negative cofitness