Top cofit genes for PP_2144 from Pseudomonas putida KT2440

Transcriptional regulator, TetR family
SEED: Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1623		RNA polymerase, sigma S (sigma 38) factor	0.86	0.59
2	PP_0674		ADP/ATP ratio sensor and inhibitor of translation	0.69	0.42
3	PP_0123		DNA polymerase I, 5	no	0.42
4	PP_4880		exoribonuclease R	0.46	0.39
5	PP_5053		Protein-export protein SecB	0.43	0.38
6	PP_4379		Beta-ketoacyl-acyl-carrier-protein synthase I	no	0.37
7	PP_4375		flagellar chaperone, inhibits premature FliC assembly	no	0.36
8	PP_2378		Fe/S biogenesis protein NfuA	0.47	0.35
9	PP_2889		putative Transmembrane regulator PrtR	0.56	0.35
10	PP_0191		Transcriptional regulatory protein AlgQ	0.78	0.35
11	PP_0697		ribosomal-protein-S18-alanine N-acetyltransferase	0.25	0.34
12	PP_0397		protein kinase	0.70	0.33
13	PP_0396		conserved protein of unknown function	0.41	0.33
14	PP_0395		putative type IV piliation protein	0.38	0.32
15	PP_5309		oxidative and nitrosative stress transcriptional dual regulator	0.31	0.32
16	PP_2458		ribokinase	no	0.31
17	PP_0832		S-adenosylmethionine:tRNA ribosyltransferase-isomerase	0.50	0.31
18	PP_2387		conserved protein of unknown function	no	0.30
19	PP_4546		ATP-dependent helicase HrpA	0.50	0.30
20	PP_1734		Probable septum site-determining protein MinC	no	0.30

Or look for negative cofitness