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  • Top cofit genes for PP_2121 from Pseudomonas putida KT2440

    putative Lipoprotein
    SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5229 conserved protein of unknown function 0.51 0.24
    2 PP_1455 conserved protein of unknown function no 0.23
    3 PP_1629 Protein RecA no 0.23
    4 PP_0872 Peptide chain release factor 3 no 0.23
    5 PP_4546 ATP-dependent helicase HrpA no 0.22
    6 PP_1504 conserved protein of unknown function no 0.22
    7 PP_2549 conserved protein of unknown function no 0.22
    8 PP_3564 Transcriptional regulator, AraC family no 0.22
    9 PP_5265 Xanthine phosphoribosyltransferase 0.30 0.21
    10 PP_5543 protein of unknown function no 0.21
    11 PP_2210 LysR family transcriptional regulator 0.58 0.21
    12 PP_5166 Sigma-54 dependent transcriptional regulator no 0.20
    13 PP_3503 Sigma-54 dependent transcriptional regulator no 0.20
    14 PP_0769 Sensor histidine kinase no 0.20
    15 PP_2475 Transcriptional regulator, TetR family no 0.20
    16 PP_0208 putative Nitrate ABC transporter, permease protein no 0.20
    17 PP_t29 tRNA-Ala no 0.20
    18 PP_0994 putative RNA polymerase sigma factor no 0.20
    19 PP_0679 conserved exported protein of unknown function no 0.20
    20 PP_1824 Smr domain protein no 0.20

    Or look for negative cofitness