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  • Top cofit genes for PP_2120 from Pseudomonas putida KT2440

    Methyl-accepting chemotaxis protein CtpH
    SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
    KEGG: methyl-accepting chemotaxis protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.19
    2 PP_3856 conserved protein of unknown function no 0.19
    3 PP_4862 3-hydroxy acid dehydrogenase, NADP-dependent / malonic semialdehyde reductase no 0.18
    4 PP_0799 histidine-specific outer membrane porin D 0.66 0.18
    5 PP_2187 Universal stress protein family no 0.18
    6 PP_1656 ATP:GTP 3'-pyrophosphotransferase no 0.18
    7 PP_2949 putative permease no 0.17
    8 PP_1881 conserved protein of unknown function no 0.17
    9 PP_3378 putative 2-ketogluconokinase no 0.17
    10 PP_2880 Transcriptional regulator, TetR family no 0.16
    11 PP_2547 Transcriptional regulator, LysR family no 0.16
    12 PP_5203 5-formyltetrahydrofolate cyclo-ligase no 0.16
    13 PP_5351 glucose-6-phosphate 1-dehydrogenase no 0.16
    14 PP_2007 P-47-related protein no 0.16
    15 PP_4312 conserved exported protein of unknown function no 0.16
    16 PP_5639 conserved exported protein of unknown function no 0.16
    17 PP_3107 conserved protein of unknown function no 0.16
    18 PP_2593 Ferric siderophore ABC transporter, permease protein no 0.16
    19 PP_3186 putative Transcriptional activator no 0.16
    20 PP_1391 Transcriptional regulator, LysR family no 0.15

    Or look for negative cofitness