Top cofit genes for PP_2113 from Pseudomonas putida KT2440

Ribosomal RNA large subunit methyltransferase M
SEED: LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM
KEGG: ribosomal RNA large subunit methyltransferase M

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4964		D-erythrose 4-phosphate dehydrogenase	0.67	0.22
2	PP_2511		conserved protein of unknown function	no	0.21
3	PP_2864		conserved protein of unknown function	0.31	0.20
4	PP_4171		conserved exported protein of unknown function	no	0.17
5	PP_0564		conserved protein of unknown function	0.48	0.17
6	PP_0610		conserved exported protein of unknown function	0.60	0.17
7	PP_0030		metal-sensor histidine kinase	no	0.17
8	PP_3127		putative Exopolysaccharide transport protein	no	0.17
9	PP_0217		delta-9 fatty acid desaturase	no	0.16
10	PP_4468		Transcriptional regulator, Cro/CI family	no	0.16
11	PP_0015		putative transposon protein	no	0.16
12	PP_2299		Trigger factor	0.30	0.16
13	PP_2948		Transcriptional regulator, GntR family	no	0.16
14	PP_1761		diguanylate cyclase with phosphodiesterase domain	no	0.16
15	PP_3013		conserved protein of unknown function	no	0.15
16	PP_2774		glycine betaine ABC transporter, ATPase/permease fusion protein	no	0.15
17	PP_1790		putative Acylneuraminate cytidylyltransferase	no	0.15
18	PP_1798		Outer membrane efflux protein	no	0.15
19	PP_2231		putative permease of the drug/metabolite transporter (DMT) superfamily	0.52	0.15
20	PP_0020		hypothetical protein	no	0.15

Or look for negative cofitness