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  • Top cofit genes for PP_2112 from Pseudomonas putida KT2440

    aconitate hydratase 1
    SEED: Aconitate hydratase (EC 4.2.1.3)
    KEGG: aconitate hydratase 1

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4286 allantoinase 0.60 0.20
    2 PP_0949 putative ATP-binding protein UPF0042 0.62 0.19
    3 PP_4683 transglycosylase/transpeptidase no 0.19
    4 PP_0951 Ribosome hibernation promoting factor 0.79 0.18
    5 PP_1860 Organic hydroperoxide resistance transcriptional regulator 0.41 0.18
    6 PP_1646 putative Thioredoxin 0.31 0.17
    7 PP_2017 aminopeptidase N 0.94 0.16
    8 PP_4918 conserved protein of unknown function 0.25 0.16
    9 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) 0.52 0.16
    10 PP_4779 AMP nucleosidase 0.91 0.16
    11 PP_0686 conserved protein of unknown function 0.22 0.15
    12 PP_3737 vanillate O-demethylase oxidoreductase no 0.15
    13 PP_5502 ribosome modulation factor 0.14 0.15
    14 PP_3431 ThiJ/PfpI family protein no 0.15
    15 PP_4591 Ribonuclease D 0.88 0.15
    16 PP_2338 2-methylcitrate dehydratase 0.89 0.15
    17 PP_4588 putative oxidoreductase (nitroreductase family) no 0.15
    18 PP_0711 putative hydrolase no 0.15
    19 PP_3736 vanillate O-demethylase oxygenase subunit no 0.15
    20 PP_3815 Polyamine ABC transporter, permease protein no 0.15

    Or look for negative cofitness