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  • Top cofit genes for PP_2096 from Pseudomonas putida KT2440

    fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase
    SEED: 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)
    KEGG: ribosomal RNA large subunit methyltransferase L

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5283 periplasmic dipeptide transport protein 0.37 0.62
    2 PP_2148 transcription-repair coupling factor 0.50 0.59
    3 PP_1627 conserved protein of unknown function no 0.58
    4 PP_1777 phosphomannomutase 0.67 0.55
    5 PP_3627 conserved protein of unknown function no 0.55
    6 PP_1798 Outer membrane efflux protein no 0.55
    7 PP_1663 conserved exported protein of unknown function no 0.54
    8 PP_0540 conserved inner membrane protein 0.83 0.53
    9 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.56 0.53
    10 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.52
    11 PP_4720 putative RNA binding protein 0.63 0.51
    12 PP_1797 HlyD family secretion protein no 0.51
    13 PP_1774 conserved exported protein of unknown function no 0.50
    14 PP_5279 conserved protein of unknown function 0.36 0.50
    15 PP_4726 Chaperone protein DnaJ 0.62 0.50
    16 PP_3769 conserved exported protein of unknown function no 0.50
    17 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.62 0.49
    18 PP_1871 Protease HtpX 0.33 0.49
    19 PP_4872 putative enzyme of unknown function 0.16 0.49
    20 PP_1204 putative Lipoprotein 0.60 0.49

    Or look for negative cofitness