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  • Top cofit genes for PP_2094 from Pseudomonas putida KT2440

    putative Nitrate-binding protein NasS
    SEED: Nitrate ABC transporter, nitrate-binding protein
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1705 nitrite reductase [NAD(P)H] large subunit 0.95 0.74
    2 PP_2093 NasT 0.96 0.73
    3 PP_2092 Nitrate transporter 0.88 0.71
    4 PP_1706 Nitrite reductase 0.73 0.71
    5 PP_1703 assimilatory nitrate reductase/sulfite reductase 0.60 0.60
    6 PP_1589 uridylyltransferase 0.93 0.46
    7 PP_5047 two-component system sensory histidine kinase/phosphatase GlnL/GlnG 0.96 0.42
    8 PP_1294 molybdopterin synthase large subunit 0.89 0.41
    9 PP_2123 molybdenum::molybdopterin ligase 0.92 0.37
    10 PP_5048 two-component system DNA-binding transcriptional dual regulator GlnL/GlnG 0.94 0.35
    11 PP_2122 molybdenum cofactor biosynthesis protein B 0.86 0.32
    12 PP_1292 Cyclic pyranopterin monophosphate synthase accessory protein 0.22 0.31
    13 PP_4597 Cyclic pyranopterin monophosphate synthase 0.16 0.28
    14 PP_1293 molybdopterin synthase small subunit 0.19 0.27
    15 PP_2091 putative Serine/threonine-protein kinase 0.79 0.27
    16 PP_2088 RNA polymerase sigma factor SigX no 0.27
    17 PP_5233 ammonium transporter AmtB 0.90 0.26
    18 PP_5075 glutamate synthase (NADPH) beta subunit 0.91 0.25
    19 PP_2140 conserved protein of unknown function 0.89 0.24
    20 PP_5076 L-glutamate synthase(NADPH) alpha subunit 0.94 0.22

    Or look for negative cofitness