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Cofit
Protein
Homologs
Top cofit genes for PP_2087 from
Pseudomonas putida KT2440
CmpX protein
SEED: CmpX
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_3248
Dyp-type peroxidase family protein
no
0.33
2
PP
_4700
pantothenate synthetase
no
0.32
3
PP
_1629
Protein RecA
no
0.32
4
PP
_4699
3-methyl-2-oxobutanoate hydroxymethyltransferase
no
0.31
5
PP
_5352
DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex
0.70
0.31
6
PP
_0691
Glutamate 5-kinase
0.52
0.27
7
PP
_1206
basic-amino-acid specific porin OprD
0.71
0.27
8
PP
_2000
amidophosphoribosyl transferase
no
0.27
9
PP
_2386
conserved protein of unknown function
no
0.26
10
PP
_0855
conserved protein of unknown function
0.78
0.26
11
PP
_0938
conserved protein of unknown function
0.21
0.26
12
PP
_0856
conserved lipoprotein of unknown function
0.35
0.26
13
PP
_1654
cysteine synthase B
no
0.26
14
PP
_1353
conserved membrane protein of unknown function
no
0.25
15
PP
_2336
aconitate hydratase 1
0.68
0.24
16
PP
_4999
dihydroorotase-like protein
0.53
0.24
17
PP
_4724
Carbamoyl-phosphate synthase small chain
no
0.24
18
PP
_5227
diaminopimelate decarboxylase
0.59
0.23
19
PP
_0962
toluene-tolerance protein
0.25
0.23
20
PP
_2327
transcriptional dual regulator / CysB-O-acetyl-L-serine
0.40
0.23
Or look for
negative cofitness