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  • Top cofit genes for PP_2084 from Pseudomonas putida KT2440

    Putative regulator of ribonuclease activity
    SEED: Ribonuclease E inhibitor RraA
    KEGG: regulator of ribonuclease activity A

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2091 putative Serine/threonine-protein kinase no 0.26
    2 PP_5659 protein of unknown function no 0.23
    3 PP_4116 isocitrate lyase 0.80 0.23
    4 PP_0356 malate synthase G 0.82 0.23
    5 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 0.83 0.21
    6 PP_1743 acetate permease no 0.21
    7 PP_0938 conserved protein of unknown function 0.48 0.21
    8 PP_2320 conserved exported protein of unknown function 0.71 0.21
    9 PP_4704 conserved protein of unknown function no 0.20
    10 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase no 0.20
    11 PP_4487 acetyl-CoA synthetase 0.83 0.19
    12 PP_2316 putative ABC transporter, permease protein 0.68 0.19
    13 PP_3123 acetoacetyl CoA-transferase (subunit B) no 0.19
    14 PP_2323 conserved protein of unknown function no 0.19
    15 PP_1695 putative Sodium-solute symporter/sensory box histidine kinase/response regulator 0.88 0.19
    16 PP_3754 Beta-ketothiolase BktB 0.50 0.19
    17 PP_2386 conserved protein of unknown function no 0.18
    18 PP_4514 putative esterase of the alpha-beta hydrolase superfamily 0.60 0.18
    19 PP_4571 cysteine synthase A no 0.18
    20 PP_2211 Transcriptional regulator, AraC family 0.33 0.18

    Or look for negative cofitness