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  • Top cofit genes for PP_2031 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: hypothetical protein PA3071

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2027 conserved exported protein of unknown function 0.91 0.54
    2 PP_2030 conserved protein of unknown function 0.86 0.51
    3 PP_1036 membrane-bound lytic murein transglycosylase F 0.89 0.47
    4 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat 0.90 0.46
    5 PP_2032 putative ATPase 0.99 0.42
    6 PP_2029 von Willebrand factor type A domain protein 0.99 0.41
    7 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.42 0.39
    8 PP_1627 conserved protein of unknown function no 0.38
    9 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase 0.42 0.38
    10 PP_1797 HlyD family secretion protein no 0.38
    11 PP_1798 Outer membrane efflux protein no 0.37
    12 PP_1774 conserved exported protein of unknown function no 0.37
    13 PP_1355 Muropeptide permease AmpG no 0.36
    14 PP_3627 conserved protein of unknown function no 0.36
    15 PP_2148 transcription-repair coupling factor 0.22 0.36
    16 PP_1871 Protease HtpX no 0.35
    17 PP_0405 conserved protein of unknown function 0.34 0.34
    18 PP_5283 periplasmic dipeptide transport protein no 0.34
    19 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase no 0.34
    20 PP_5284 UPF0758 protein PP_5284 no 0.33

    Or look for negative cofitness