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  • Top cofit genes for PP_2029 from Pseudomonas putida KT2440

    von Willebrand factor type A domain protein
    SEED: BatA (Bacteroides aerotolerance operon)
    KEGG: uncharacterized protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1036 membrane-bound lytic murein transglycosylase F 0.96 0.62
    2 PP_2027 conserved exported protein of unknown function 0.99 0.62
    3 PP_2030 conserved protein of unknown function 0.93 0.55
    4 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat 0.99 0.52
    5 PP_1627 conserved protein of unknown function no 0.48
    6 PP_1798 Outer membrane efflux protein no 0.48
    7 PP_2032 putative ATPase 0.99 0.48
    8 PP_2148 transcription-repair coupling factor 0.65 0.47
    9 PP_1797 HlyD family secretion protein no 0.45
    10 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.56 0.44
    11 PP_1871 Protease HtpX 0.32 0.44
    12 PP_1204 putative Lipoprotein 0.31 0.44
    13 PP_1774 conserved exported protein of unknown function no 0.44
    14 PP_3627 conserved protein of unknown function no 0.42
    15 PP_1777 phosphomannomutase 0.40 0.42
    16 PP_1355 Muropeptide permease AmpG no 0.41
    17 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.41
    18 PP_2031 conserved protein of unknown function 0.99 0.41
    19 PP_5283 periplasmic dipeptide transport protein no 0.41
    20 PP_0937 endoribonuclease G (RNAse G) 0.79 0.41

    Or look for negative cofitness