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  • Top cofit genes for PP_2027 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: BatD

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1036 membrane-bound lytic murein transglycosylase F 0.98 0.79
    2 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat 0.99 0.71
    3 PP_2030 conserved protein of unknown function 0.96 0.69
    4 PP_2148 transcription-repair coupling factor 0.66 0.65
    5 PP_1627 conserved protein of unknown function no 0.64
    6 PP_1798 Outer membrane efflux protein no 0.63
    7 PP_2032 putative ATPase 0.99 0.62
    8 PP_2029 von Willebrand factor type A domain protein 0.99 0.62
    9 PP_1871 Protease HtpX 0.39 0.61
    10 PP_1777 phosphomannomutase no 0.60
    11 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase no 0.60
    12 PP_3627 conserved protein of unknown function no 0.60
    13 PP_1355 Muropeptide permease AmpG no 0.60
    14 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.44 0.59
    15 PP_1774 conserved exported protein of unknown function no 0.59
    16 PP_5283 periplasmic dipeptide transport protein no 0.58
    17 PP_1797 HlyD family secretion protein no 0.58
    18 PP_5279 conserved protein of unknown function no 0.57
    19 PP_0405 conserved protein of unknown function no 0.57
    20 PP_0540 conserved inner membrane protein no 0.56

    Or look for negative cofitness