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Cofit
Protein
Homologs
Top cofit genes for PP_2025 from
Pseudomonas putida KT2440
Exonuclease SbcD
SEED: Exonuclease SbcD
KEGG: exonuclease SbcD
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_2210
LysR family transcriptional regulator
no
0.32
2
PP
_2782
Pyridoxalphosphate dependent aminotransferase, class III
no
0.30
3
PP
_1824
Smr domain protein
no
0.29
4
PP
_4542
putative ABC transporter, ATP-binding protein/permease protein
0.23
0.28
5
PP
_3770
conserved protein of unknown function
0.20
0.28
6
PP
_1821
Glutathione S-transferase family protein
no
0.27
7
PP
_1039
sec-independent protein translocase protein
no
0.27
8
PP
_2040
Major facilitator family transporter
no
0.27
9
PP
_0106
cytochrome c oxidase subunit 3
no
0.26
10
PP
_2864
conserved protein of unknown function
no
0.25
11
PP
_2043
conserved exported protein of unknown function
no
0.25
12
PP
_1707
D-isomer specific 2-hydroxyacid dehydrogenase family protein
no
0.25
13
PP
_3751
putative Cyanate transporter
no
0.25
14
PP
_0208
putative Nitrate ABC transporter, permease protein
no
0.25
15
PP
_5137
ferric iron ABC transporter, ATP-binding protein
no
0.24
16
PP
_5651
conserved protein of unknown function
no
0.24
17
PP
_2573
conserved protein of unknown function
no
0.24
18
PP
_5157
conserved exported protein of unknown function
no
0.24
19
PP
_5515
protein of unknown function
no
0.24
20
PP
_1504
conserved protein of unknown function
no
0.24
Or look for
negative cofitness