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  • Top cofit genes for PP_2025 from Pseudomonas putida KT2440

    Exonuclease SbcD
    SEED: Exonuclease SbcD
    KEGG: exonuclease SbcD

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2210 LysR family transcriptional regulator no 0.32
    2 PP_2782 Pyridoxalphosphate dependent aminotransferase, class III no 0.30
    3 PP_1824 Smr domain protein no 0.29
    4 PP_4542 putative ABC transporter, ATP-binding protein/permease protein 0.53 0.28
    5 PP_3770 conserved protein of unknown function 0.20 0.28
    6 PP_1821 Glutathione S-transferase family protein no 0.27
    7 PP_1039 sec-independent protein translocase protein no 0.27
    8 PP_2040 Major facilitator family transporter no 0.27
    9 PP_0106 cytochrome c oxidase subunit 3 0.20 0.26
    10 PP_2864 conserved protein of unknown function no 0.25
    11 PP_2043 conserved exported protein of unknown function no 0.25
    12 PP_1707 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.25
    13 PP_3751 putative Cyanate transporter no 0.25
    14 PP_0208 putative Nitrate ABC transporter, permease protein no 0.25
    15 PP_5137 ferric iron ABC transporter, ATP-binding protein no 0.24
    16 PP_5651 conserved protein of unknown function no 0.24
    17 PP_2573 conserved protein of unknown function no 0.24
    18 PP_5157 conserved exported protein of unknown function no 0.24
    19 PP_5515 protein of unknown function no 0.24
    20 PP_1504 conserved protein of unknown function no 0.24

    Or look for negative cofitness