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  • Top cofit genes for PP_2019 from Pseudomonas putida KT2440

    adhesin-associated MmpL efflux pump (from data)
    Original annotation: putative multidrug efflux transporter, RND family
    SEED: FIG005548: transport protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) 0.98 0.90
    2 PP_0765 putative adhesin (DUF1302) (from data) 0.92 0.88
    3 PP_2018 adhesin-associated BNR repeat protein (from data) 0.98 0.80
    4 PP_0767 Transcriptional regulator, LuxR family 0.75 0.63
    5 PP_1181 DNA-binding response regulator 0.65 0.56
    6 PP_1182 Sensor histidine kinase 0.78 0.53
    7 PP_3925 conserved protein of unknown function 0.53 0.49
    8 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.30 0.49
    9 PP_2436 Transcriptional regulator, LysR family no 0.48
    10 PP_1941 conserved protein of unknown function no 0.48
    11 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.77 0.43
    12 PP_4817 MaoC domain protein no 0.43
    13 PP_0368 putative Acyl-CoA dehydrogenase 0.68 0.43
    14 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) 0.30 0.39
    15 PP_4948 Acyl-CoA dehydrogenase family protein 0.71 0.38
    16 PP_2806 Transcriptional regulator, TetR family no 0.33
    17 PP_0356 malate synthase G 0.27 0.30
    18 PP_0370 Acyl-CoA dehydrogenase family protein 0.36 0.29
    19 PP_0248 Probable alpha-L-glutamate ligase no 0.29
    20 PP_4116 isocitrate lyase 0.58 0.29

    Or look for negative cofitness