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  • Top cofit genes for PP_2000 from Pseudomonas putida KT2440

    amidophosphoribosyl transferase
    SEED: Amidophosphoribosyltransferase (EC 2.4.2.14)
    KEGG: amidophosphoribosyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4999 dihydroorotase-like protein 0.92 0.67
    2 PP_4724 Carbamoyl-phosphate synthase small chain 0.95 0.67
    3 PP_4723 Carbamoyl-phosphate synthase large chain 0.97 0.63
    4 PP_0691 Glutamate 5-kinase 0.94 0.63
    5 PP_4799 putative Muramoyltetrapeptide carboxypeptidase 0.89 0.52
    6 PP_4700 pantothenate synthetase 0.92 0.50
    7 PP_1664 phosphoribosylglycinamide formyltransferase 1 0.99 0.46
    8 PP_3999 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase 0.93 0.44
    9 PP_5095 pyrroline-5-carboxylate reductase 0.93 0.44
    10 PP_1654 cysteine synthase B 0.76 0.41
    11 PP_0339 Pyruvate dehydrogenase E1 component 0.75 0.41
    12 PP_4909 phosphoserine phosphatase 0.96 0.41
    13 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.90 0.40
    14 PP_5227 diaminopimelate decarboxylase 0.91 0.39
    15 PP_3248 Dyp-type peroxidase family protein 0.64 0.39
    16 PP_5015 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) 0.95 0.38
    17 PP_4693 RNA polymerase-binding transcription factor DksA 0.86 0.38
    18 PP_2371 Sulphite reductase hemoprotein, beta subunit 0.94 0.37
    19 PP_0856 conserved lipoprotein of unknown function 0.77 0.37
    20 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.53 0.36

    Or look for negative cofitness