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  • Top cofit genes for PP_1999 from Pseudomonas putida KT2440

    membrane protein required for colicin V production
    SEED: Colicin V production protein
    KEGG: membrane protein required for colicin V production

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1232 conserved exported protein of unknown function 0.36 0.25
    2 PP_4148 putative inner membrane ABC transporter permease protein 0.68 0.23
    3 PP_4900 epoxyqueuosine reductase no 0.22
    4 PP_4721 conserved membrane protein of unknown function no 0.22
    5 PP_0938 conserved protein of unknown function 0.27 0.21
    6 PP_1206 basic-amino-acid specific porin OprD 0.49 0.21
    7 PP_2475 Transcriptional regulator, TetR family no 0.19
    8 PP_4880 exoribonuclease R no 0.18
    9 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.40 0.18
    10 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.50 0.18
    11 PP_4994 conserved protein of unknown function 0.66 0.17
    12 PP_3136 putative O-acetyltransferase no 0.17
    13 PP_5139 cadmium translocating P-type ATPase no 0.17
    14 PP_1226 pre-queuosine 0 synthase 0.40 0.17
    15 PP_0003 16S RNA methyltransferase no 0.17
    16 PP_0063 putative Lipid A biosynthesis lauroyl acyltransferase no 0.16
    17 PP_3247 Transporter, bile acid/Na+ symporter family no 0.16
    18 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.27 0.16
    19 PP_0247 Osmolarity sensor protein EnvZ 0.42 0.16
    20 PP_1719 Tail-specific protease prc 0.56 0.16

    Or look for negative cofitness