Top cofit genes for PP_1994 from Pseudomonas putida KT2440

tRNA pseudouridine (38-40)synthase
SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
KEGG: tRNA pseudouridine synthase A

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4124		NADH-quinone oxidoreductase subunit G	0.88	0.45
2	PP_4121		NADH-quinone oxidoreductase subunit C/D	0.87	0.44
3	PP_2336		aconitate hydratase 1	no	0.44
4	PP_4546		ATP-dependent helicase HrpA	0.66	0.44
5	PP_5310		junction-specific ATP-dependent DNA helicase	0.61	0.43
6	PP_4129		NADH:ubiquinone oxidoreductase, membrane subunit L	0.88	0.42
7	PP_0123		DNA polymerase I, 5	0.76	0.41
8	PP_4880		exoribonuclease R	0.90	0.41
9	PP_0393		putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	no	0.41
10	PP_4710		tRNA pseudouridine 55 synthase	0.75	0.41
11	PP_1734		Probable septum site-determining protein MinC	0.23	0.41
12	PP_4988		signal transduction histidine kinase CheA/CheY-like receiver	no	0.41
13	PP_4722		Transcription elongation factor GreA	0.88	0.40
14	PP_5309		oxidative and nitrosative stress transcriptional dual regulator	0.69	0.39
15	PP_0832		S-adenosylmethionine:tRNA ribosyltransferase-isomerase	0.79	0.38
16	PP_4126		NADH-quinone oxidoreductase subunit I	0.87	0.38
17	PP_4131		NADH-quinone oxidoreductase subunit N	0.88	0.37
18	PP_4120		NADH-quinone oxidoreductase subunit B	0.88	0.37
19	PP_1783		dTDP-glucose pyrophosphorylase	0.86	0.37
20	PP_5028		proline iminopeptidase	0.82	0.36

Or look for negative cofitness