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  • Top cofit genes for PP_1992 from Pseudomonas putida KT2440

    aspartate-semialdehyde dehydrogenase
    SEED: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
    KEGG: aspartate-semialdehyde dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1993 putative motility protein fimV 0.32 0.25
    2 PP_4392 chemotaxis protein methyltransferase no 0.20
    3 PP_4338 Chemotaxis histidine kinase CheA no 0.20
    4 PP_4994 conserved protein of unknown function 0.23 0.19
    5 PP_4334 ParA family protein 0.30 0.19
    6 PP_3666 Metabolite MFS transporter, MHS family no 0.19
    7 PP_1877 free methionine-(R)-sulfoxide reductase no 0.18
    8 PP_1898 MotA/TolQ/ExbB proton channel family protein no 0.17
    9 PP_4471 Magnesium transporter 0.26 0.17
    10 PP_0484 transporter of an unknown substrate 0.53 0.16
    11 PP_4333 CheW domain protein 0.24 0.16
    12 PP_0218 Sensory box protein no 0.16
    13 PP_5327 putative phosphate ABC transporter, permease subunit 0.74 0.16
    14 PP_2618 conserved exported protein of unknown function no 0.15
    15 PP_4332 Chemotaxis protein CheW 0.55 0.15
    16 PP_3893 putative Phage DNA helicase no 0.15
    17 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.73 0.15
    18 PP_4617 leucine dehydrogenase no 0.15
    19 PP_1318 Cytochrome b no 0.15
    20 PP_1866 Phospho-2-dehydro-3-deoxyheptonate aldolase no 0.15

    Or look for negative cofitness