Top cofit genes for PP_1987 from Pseudomonas putida KT2440

Methlytransferase, UbiE/COQ5 family
SEED: SAM-dependent methyltransferase YafE (UbiE paralog)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2756		conserved protein of unknown function	no	0.26
2	PP_3228		putative Periplasmic aliphatic sulfonate-binding protein	no	0.20
3	PP_4785		conserved exported protein of unknown function	0.40	0.20
4	PP_2021		L-alpha-hydroxyglutaric acid gamma-lactonase	no	0.19
5	PP_3950		Methyl-accepting chemotaxis transducer	no	0.19
6	PP_0138		conserved membrane protein of unknown function	0.28	0.18
7	PP_4237		periplasmic protein disulfide isomerase	no	0.18
8	PP_0206		Ferredoxin, 4Fe-4S	no	0.18
9	PP_2541		Transcriptional factor-related protein	no	0.18
10	PP_4178		Dienelactone hydrolase family protein	no	0.17
11	PP_2591		Ferric anguibactin-binding protein	no	0.17
12	PP_1890		Type 1 pili chaperone protein FimC	0.28	0.17
13	PP_0110		CyoE like protoheme IX farnesyltransferase	0.34	0.17
14	PP_2659		phosphate ABC transporter ATP-binding protein	no	0.17
15	PP_0593		putative ribosome-binding factor	0.21	0.17
16	PP_4830		precorrin-6Y C(5,15)-methyltransferase	0.46	0.17
17	PP_4827		Precorrin-2 C(20)-methyltransferase	0.57	0.17
18	PP_4245		hydroxyproline acetylase	no	0.17
19	PP_2228		putative K(+)/H(+) antiporter subunit D	0.43	0.17
20	PP_4841		putative Urea ABC transporter, periplasmic protein	no	0.16

Or look for negative cofitness