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  • Top cofit genes for PP_1981 from Pseudomonas putida KT2440

    tRNA-dihydrouridine synthase C
    SEED: tRNA-dihydrouridine synthase C (EC 1.-.-.-)
    KEGG: tRNA-dihydrouridine synthase C

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1325 putative lipoprotein no 0.22
    2 PP_5294 Ribonuclease PH no 0.21
    3 PP_4286 allantoinase 0.34 0.21
    4 PP_3916 conserved protein of unknown function no 0.21
    5 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase no 0.21
    6 PP_4682 conserved protein of unknown function containing tetratricopeptide repeat domain 0.35 0.21
    7 PP_4900 epoxyqueuosine reductase 0.33 0.21
    8 PP_4008 ATP-dependent serine protease 0.61 0.20
    9 PP_3128 putative Exopolysaccharide biosynthesis/transport protein no 0.19
    10 PP_0823 Selenide, water dikinase 0.23 0.19
    11 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) no 0.19
    12 PP_0995 conserved membrane protein of unknown function no 0.19
    13 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.43 0.19
    14 PP_2456 D-ribose ABC transporter - permease subunit 0.26 0.18
    15 PP_4250 cytochrome c oxidase subunit I, cbb3-type no 0.18
    16 PP_2971 transposase no 0.18
    17 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.18
    18 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 no 0.18
    19 PP_2293 DNA maturase B no 0.18
    20 PP_5502 ribosome modulation factor 0.34 0.18

    Or look for negative cofitness