Top cofit genes for PP_1978 from Pseudomonas putida KT2440

Transcriptional regulator, TetR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0504		Outer membrane protein OprG	0.70	0.25
2	PP_3415		Transcriptional regulator, LacI family	0.40	0.24
3	PP_5328		putative phosphate transport system permease protein	no	0.24
4	PP_4937		toluene tolerance protein	0.62	0.23
5	PP_4549		long-chain-fatty-acid/CoA ligase	0.88	0.23
6	PP_1325		putative lipoprotein	0.71	0.22
7	PP_0345		putative Heptose kinase WapP	0.65	0.22
8	PP_4590		conserved protein of unknown function	no	0.21
9	PP_0498		conserved protein of unknown function	no	0.21
10	PP_3957		choline/carnitine/betaine transporter BetTC	no	0.21
11	PP_4545		beta-ketodecanoyl-(Acyl-carrier-protein) synthase	0.89	0.21
12	PP_0496		Sodium/alanine symporter	no	0.21
13	PP_2319		conserved protein of unknown function	no	0.20
14	PP_1318		Cytochrome b	0.35	0.20
15	PP_2379		putative cytochrome oxidase biogenesis protein	no	0.20
16	PP_4776		AsnC family transcriptional regulator	no	0.20
17	PP_2485		conserved protein of unknown function	no	0.20
18	PP_4721		conserved membrane protein of unknown function	no	0.20
19	PP_4859		Transcriptional regulator, TetR family	0.30	0.19
20	PP_1059		Uncharacterized amino acid permease YtnA	no	0.19

Or look for negative cofitness