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Cofit
Protein
Homologs
Top cofit genes for PP_1970 from
Pseudomonas putida KT2440
putative Lipoprotein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1087
Outer membrane protein, OmpA family
0.89
0.48
2
PP
_4386
flagellar basal-body rod protein FlgF
0.79
0.47
3
PP
_4380
Flagellar hook-associated protein FlgL
0.84
0.47
4
PP
_4388
Flagellar hook protein FlgE
0.84
0.46
5
PP
_4337
chemotaxis response regulator protein-glutamate methylesterase of group 1 operon
0.82
0.45
6
PP
_4366
flagellum-specific ATP synthase
0.83
0.45
7
PP
_4389
Flagellar basal-body rod modification protein FlgD
0.74
0.45
8
PP
_4352
flagellin export apparatus, substrate specificity protein
0.83
0.45
9
PP
_4361
Flagellar hook-length control protein FliK
0.83
0.45
10
PP
_4391
flagellar basal-body rod protein FlgB
0.84
0.45
11
PP
_4378
flagellin, filament structural protein
no
0.44
12
PP
_4381
Flagellar hook-associated protein FlgK
0.83
0.44
13
PP
_4376
flagellar filament capping protein
0.83
0.44
14
PP
_4385
flagellar basal-body rod protein FlgG
0.80
0.44
15
PP
_4341
RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons
0.82
0.44
16
PP
_4904
Flagellar motor rotation protein
0.54
0.44
17
PP
_4382
Peptidoglycan hydrolase FlgJ
0.83
0.44
18
PP
_4390
flagellar basal-body rod protein FlgC
0.83
0.44
19
PP
_4344
flagellar export pore protein
0.84
0.43
20
PP
_4335
flagellar motor protein
0.82
0.43
Or look for
negative cofitness