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Cofit
Protein
Homologs
Top cofit genes for PP_1968 from
Pseudomonas putida KT2440
TetR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0765
putative adhesin (DUF1302)
(from data)
0.30
0.34
2
PP
_0176
putative efflux transporter
0.59
0.33
3
PP
_0178
putative efflux pump
no
0.33
4
PP
_0766
adhesin-associated sorting protein (DUF1329)
(from data)
0.36
0.29
5
PP
_0179
putative efflux transporter
no
0.28
6
PP
_0177
conserved protein of unknown function
no
0.24
7
PP
_3539
putative Transcriptional regulator
0.22
0.24
8
PP
_3658
putative Aromatic compound MFS transporter
no
0.22
9
PP
_3656
putative Aromatic compound-specific porin
no
0.21
10
PP
_3551
DNA-binding response regulator, LuxR family
no
0.20
11
PP
_4762
Acyl-CoA thioesterase II
no
0.19
12
PP
_3659
transcriptional regulator, AraC family
no
0.19
13
PP
_4150
microcin C transporter - ATP binding subunit
no
0.19
14
PP
_4295
TetR family transcriptional regulator
0.36
0.18
15
PP
_4148
putative inner membrane ABC transporter permease protein
0.35
0.18
16
PP
_2919
Transcriptional regulator, LysR family
no
0.17
17
PP
_2545
trans-aconitate methyltransferase
0.41
0.17
18
PP
_2136
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
no
0.17
19
PP
_4549
long-chain-fatty-acid/CoA ligase
no
0.17
20
PP
_2137
beta-ketoadipyl CoA thiolase, beta component
0.26
0.16
Or look for
negative cofitness