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  • Top cofit genes for PP_1968 from Pseudomonas putida KT2440

    TetR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0765 putative adhesin (DUF1302) (from data) 0.30 0.34
    2 PP_0176 putative efflux transporter 0.59 0.33
    3 PP_0178 putative efflux pump no 0.33
    4 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) 0.36 0.29
    5 PP_0179 putative efflux transporter no 0.28
    6 PP_0177 conserved protein of unknown function no 0.24
    7 PP_3539 putative Transcriptional regulator 0.22 0.24
    8 PP_3658 putative Aromatic compound MFS transporter no 0.22
    9 PP_3656 putative Aromatic compound-specific porin no 0.21
    10 PP_3551 DNA-binding response regulator, LuxR family no 0.20
    11 PP_4762 Acyl-CoA thioesterase II no 0.19
    12 PP_3659 transcriptional regulator, AraC family no 0.19
    13 PP_4150 microcin C transporter - ATP binding subunit no 0.19
    14 PP_4295 TetR family transcriptional regulator 0.36 0.18
    15 PP_4148 putative inner membrane ABC transporter permease protein 0.35 0.18
    16 PP_2919 Transcriptional regulator, LysR family no 0.17
    17 PP_2545 trans-aconitate methyltransferase 0.41 0.17
    18 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase no 0.17
    19 PP_4549 long-chain-fatty-acid/CoA ligase no 0.17
    20 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.26 0.16

    Or look for negative cofitness