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Cofit
Protein
Homologs
Top cofit genes for PP_1941 from
Pseudomonas putida KT2440
conserved protein of unknown function
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_2436
Transcriptional regulator, LysR family
no
0.58
2
PP
_3925
conserved protein of unknown function
no
0.56
3
PP
_0767
Transcriptional regulator, LuxR family
no
0.53
4
PP
_1942
Transcriptional regulator, LysR family
no
0.49
5
PP
_2019
adhesin-associated MmpL efflux pump
(from data)
no
0.48
6
PP
_3474
putative Curli fiber protein CsgE
no
0.45
7
PP
_0413
Polyamine ABC transporter, permease protein
no
0.43
8
PP
_0370
Acyl-CoA dehydrogenase family protein
no
0.43
9
PP
_4948
Acyl-CoA dehydrogenase family protein
no
0.43
10
PP
_2806
Transcriptional regulator, TetR family
no
0.43
11
PP
_0368
putative Acyl-CoA dehydrogenase
no
0.42
12
PP
_0248
Probable alpha-L-glutamate ligase
no
0.42
13
PP
_2018
adhesin-associated BNR repeat protein
(from data)
no
0.42
14
PP
_0356
malate synthase G
no
0.41
15
PP
_1385
Probable efflux pump membrane transporter TtgB
no
0.41
16
PP
_1386
Probable efflux pump periplasmic linker TtgA
no
0.41
17
PP
_0766
adhesin-associated sorting protein (DUF1329)
(from data)
no
0.40
18
PP
_2137
beta-ketoadipyl CoA thiolase, beta component
no
0.40
19
PP
_2136
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
no
0.39
20
PP
_4116
isocitrate lyase
no
0.39
Or look for
negative cofitness