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  • Top cofit genes for PP_1907 from Pseudomonas putida KT2440

    Hydrolase, haloacid dehalogenase-like family
    SEED: Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C
    KEGG: phosphoglycolate phosphatase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2210 LysR family transcriptional regulator no 0.26
    2 PP_2757 putative Sugar-binding protein no 0.23
    3 PP_1445 carbohydrate-selective porin no 0.23
    4 PP_1903 putative phosphotyrosine-protein phosphatase 0.14 0.22
    5 PP_3719 Putrescine-binding periplasmic protein no 0.22
    6 PP_4836 conserved exported protein of unknown function 0.13 0.21
    7 PP_3907 conserved protein of unknown function no 0.21
    8 PP_3166 catechol 1,2-dioxygenase no 0.21
    9 PP_3916 conserved protein of unknown function no 0.21
    10 PP_3555 putative Transmembrane sensor no 0.21
    11 PP_0995 conserved membrane protein of unknown function no 0.21
    12 PP_4516 ATP-dependent DNA 3 0.63 0.20
    13 PP_5338 aspartate ammonia-lyase 0.39 0.20
    14 PP_4298 hydroxypyruvate isomerase 0.27 0.20
    15 PP_4549 long-chain-fatty-acid/CoA ligase 0.67 0.20
    16 PP_5337 LysR family transcriptional regulator 0.34 0.20
    17 PP_0882 dipeptide ABC transporter - periplasmic binding protein 0.26 0.20
    18 PP_1529 Probable cysteine desulfurase no 0.20
    19 PP_3503 Sigma-54 dependent transcriptional regulator no 0.19
    20 PP_2927 conserved protein of unknown function 0.22 0.19

    Or look for negative cofitness