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  • Top cofit genes for PP_1906 from Pseudomonas putida KT2440

    ribosomal large subunit pseudouridine synthase C
    SEED: Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase C

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0951 Ribosome hibernation promoting factor 0.78 0.43
    2 PP_5502 ribosome modulation factor 0.64 0.41
    3 PP_1318 Cytochrome b 0.52 0.38
    4 PP_4343 Flagellar biosynthesis protein FlhF 0.33 0.36
    5 PP_4250 cytochrome c oxidase subunit I, cbb3-type 0.44 0.35
    6 PP_0872 Peptide chain release factor 3 0.85 0.35
    7 PP_3484 Response regulator receiver protein no 0.35
    8 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.47 0.34
    9 PP_4143 conserved protein of unknown function 0.53 0.34
    10 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.43 0.34
    11 PP_1860 Organic hydroperoxide resistance transcriptional regulator 0.67 0.34
    12 PP_0397 protein kinase 0.67 0.34
    13 PP_0395 putative type IV piliation protein 0.69 0.33
    14 PP_0396 conserved protein of unknown function 0.66 0.33
    15 PP_2645 magnesium transporter, ATP-dependent 0.76 0.33
    16 PP_4124 NADH-quinone oxidoreductase subunit G 0.70 0.33
    17 PP_5337 LysR family transcriptional regulator 0.47 0.33
    18 PP_4261 cation-transporting P-type ATPase no 0.32
    19 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.46 0.32
    20 PP_2646 conserved protein of unknown function no 0.32

    Or look for negative cofitness