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  • Top cofit genes for PP_1896 from Pseudomonas putida KT2440

    putative ABC transporter - permease subunit
    SEED: ABC-type multidrug transport system, permease component
    KEGG: antibiotic transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3589 serine:H+ symport permease, threonine-insensitive 0.30 0.25
    2 PP_5322 putative metal ion transporter 0.22 0.24
    3 PP_1019 carbohydrate-selective porin 0.33 0.23
    4 PP_4236 putative Thiol:disulfide interchange protein dsbE 0.39 0.22
    5 PP_0850 Dual-specificity RNA methyltransferase RlmN 0.83 0.20
    6 PP_0743 conserved protein with NAD(P)-binding Rossmann-fold domain 0.48 0.20
    7 PP_2434 conserved protein of unknown function no 0.20
    8 PP_4591 Ribonuclease D 0.44 0.20
    9 PP_4519 Agglutination protein 0.41 0.20
    10 PP_3943 N-formylmaleamate deformylase no 0.20
    11 PP_4918 conserved protein of unknown function 0.29 0.20
    12 PP_1460 putative Membrane protein 0.69 0.20
    13 PP_0099 conserved protein of unknown function no 0.20
    14 PP_3146 putative Oxidoreductase 0.43 0.20
    15 PP_4143 conserved protein of unknown function 0.72 0.19
    16 PP_1875 Sensor histidine kinase/response regulator 0.78 0.19
    17 PP_0984 conserved membrane protein of unknown function no 0.19
    18 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein no 0.19
    19 PP_4235 thiol/disulfide interchange protein 2 0.29 0.19
    20 PP_4158 sensor protein 0.68 0.19

    Or look for negative cofitness