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  • Top cofit genes for PP_1891 from Pseudomonas putida KT2440

    Type 1 pili subunit FimI
    SEED: Type-1 fimbrial protein, A chain precursor
    KEGG: fimbrial protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1577 Phage tail tape meausure protein, lambda family no 0.20
    2 PP_1563 putative Phage terminase, large subunit no 0.19
    3 PP_0508 conserved exported protein of unknown function no 0.18
    4 PP_3195 conserved protein of unknown function no 0.17
    5 PP_1581 BNR domain protein no 0.17
    6 PP_0138 conserved membrane protein of unknown function no 0.17
    7 PP_1567 Capsid protein no 0.16
    8 PP_5090 putative cell division protein no 0.16
    9 PP_1898 MotA/TolQ/ExbB proton channel family protein 0.47 0.16
    10 PP_3376 putative phosphonate dehydrogenase no 0.15
    11 PP_4332 Chemotaxis protein CheW no 0.15
    12 PP_3801 putative Cation ABC transporter, periplasmic cation-binding protein no 0.15
    13 PP_5711 protein of unknown function no 0.15
    14 PP_2652 putative Hydratase/decarboxylase no 0.15
    15 PP_3858 putative Tail fiber protein no 0.15
    16 PP_2611 membrane protein of unknown function no 0.14
    17 PP_4068 Transcriptional regulator, Cro/CI family no 0.14
    18 PP_4356 Flagellar protein FliO no 0.14
    19 PP_1389 Oxaloacetate decarboxylase no 0.14
    20 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase no 0.14

    Or look for negative cofitness