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  • Top cofit genes for PP_1879 from Pseudomonas putida KT2440

    conserved protein of unknown function

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2043 conserved exported protein of unknown function no 0.29
    2 PP_3260 DNA ligase D no 0.27
    3 PP_3208 Oxidoreductase, Pdr/VanB family no 0.23
    4 PP_2009 putative 1-aminocyclopropane-1-carboxylate deaminase no 0.22
    5 PP_2034 conserved membrane protein of unknown function no 0.22
    6 PP_1882 conserved membrane protein of unknown function no 0.21
    7 PP_3287 transcriptional regulator with 4Fe-4S cluster; Crp/Fnr family no 0.20
    8 PP_1883 protein of unknown function no 0.20
    9 PP_5606 conserved exported protein of unknown function with YVTN beta-propeller repeat no 0.20
    10 PP_0706 fused O(6)-alkylguanine DNA alkyltransferase - transcriptional activator no 0.20
    11 PP_2021 L-alpha-hydroxyglutaric acid gamma-lactonase no 0.19
    12 PP_2045 Metallo-beta-lactamase family protein no 0.19
    13 PP_1853 Transcriptional regulator, LysR family no 0.19
    14 PP_3635 putative Sulfonate ABC transporter, permease protein no 0.19
    15 PP_4225 two component system DNA-binding transcriptional activator QseB no 0.19
    16 PP_5310 junction-specific ATP-dependent DNA helicase no 0.19
    17 PP_2579 putative phosphoethanolamine transferase CptA no 0.18
    18 PP_0798 GGDEF domain protein no 0.18
    19 PP_0205 putative Oxidoreductase no 0.18
    20 PP_3267 putative Clp protease no 0.18

    Or look for negative cofitness