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  • Top cofit genes for PP_1877 from Pseudomonas putida KT2440

    free methionine-(R)-sulfoxide reductase
    SEED: Free methionine-(R)-sulfoxide reductase, contains GAF domain
    KEGG: GAF domain-containing protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2074 Transcriptional regulator, LysR family no 0.21
    2 PP_5129 conserved protein of unknown function no 0.20
    3 PP_3362 Transcriptional regulator, AsnC family no 0.19
    4 PP_3376 putative phosphonate dehydrogenase 0.45 0.18
    5 PP_2024 Exonuclease SbcC no 0.18
    6 PP_1992 aspartate-semialdehyde dehydrogenase no 0.18
    7 PP_3529 dimethyl-sulfide monooxygenase no 0.17
    8 PP_2251 conserved membrane protein of unknown function no 0.17
    9 PP_1661 putative Dehydrogenase subunit no 0.17
    10 PP_3610 conserved protein of unknown function no 0.17
    11 PP_3367 conserved protein of unknown function no 0.17
    12 PP_2360 putative type 1 pili subunit CsuA/B protein no 0.17
    13 PP_0971 conserved protein of unknown function no 0.17
    14 PP_2762 acyl-CoA dehydrogenase/oxidase family protein 0.23 0.17
    15 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase no 0.17
    16 PP_3355 Beta-ketothiolase no 0.16
    17 PP_3234 Heat shock protein, HSP20 family no 0.16
    18 PP_2907 DNA-binding response regulator no 0.16
    19 PP_3916 conserved protein of unknown function no 0.16
    20 PP_2558 putative Outer membrane efflux protein no 0.15

    Or look for negative cofitness