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  • Top cofit genes for PP_1872 from Pseudomonas putida KT2440

    glutamate-pyruvate aminotransferase
    SEED: Aspartate aminotransferase (EC 2.6.1.1)
    KEGG: alanine-synthesizing transaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5149 threonine deaminase 0.87 0.33
    2 PP_0980 Probable cytosol aminopeptidase 0.65 0.30
    3 PP_2245 Transcriptional regulator, Cro/CI family no 0.30
    4 PP_3654 leucine-responsive regulatory protein no 0.28
    5 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 0.92 0.27
    6 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.46 0.26
    7 PP_5217 Polyphosphate kinase 0.74 0.25
    8 PP_3645 putative L-proline amide hydrolase no 0.25
    9 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.46 0.25
    10 PP_5035 Histidine utilization repressor 0.37 0.25
    11 PP_3653 Transporter, LysE family 0.38 0.24
    12 PP_0310 putative dimethylglycine dehydrogenase subunit 0.49 0.23
    13 PP_4754 Transcriptional regulator, TetR family no 0.23
    14 PP_5400 conserved protein of unknown function no 0.23
    15 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase 0.28 0.23
    16 PP_1224 periplasmic subunit of the TolQRA transport system 0.78 0.23
    17 PP_1505 Phosphoenolpyruvate carboxylase 0.79 0.23
    18 PP_4653 adenine:H+ symporter 0.48 0.22
    19 PP_5104 thiazole synthase no 0.22
    20 PP_5097 homoserine O-acetyltransferase 0.89 0.22

    Or look for negative cofitness