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  • Top cofit genes for PP_1871 from Pseudomonas putida KT2440

    Protease HtpX
    SEED: Probable protease htpX homolog (EC 3.4.24.-)
    KEGG: heat shock protein HtpX

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1627 conserved protein of unknown function no 0.79
    2 PP_1798 Outer membrane efflux protein no 0.79
    3 PP_2148 transcription-repair coupling factor 0.62 0.77
    4 PP_0540 conserved inner membrane protein 0.71 0.75
    5 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.54 0.74
    6 PP_1663 conserved exported protein of unknown function 0.86 0.73
    7 PP_3627 conserved protein of unknown function no 0.73
    8 PP_1204 putative Lipoprotein 0.65 0.70
    9 PP_1777 phosphomannomutase 0.32 0.69
    10 PP_1774 conserved exported protein of unknown function no 0.69
    11 PP_5283 periplasmic dipeptide transport protein 0.53 0.68
    12 PP_1797 HlyD family secretion protein no 0.67
    13 PP_1803 UDP-sugar epimerase 0.38 0.65
    14 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.48 0.65
    15 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.63
    16 PP_5279 conserved protein of unknown function no 0.62
    17 PP_2027 conserved exported protein of unknown function 0.39 0.60
    18 PP_5284 UPF0758 protein PP_5284 no 0.60
    19 PP_1800 Oxidoreductase Rmd no 0.60
    20 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase 0.77 0.60

    Or look for negative cofitness