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  • Top cofit genes for PP_1867 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Spermidine synthase (EC 2.5.1.16)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4162 conserved membrane protein of unknown function no 0.26
    2 PP_3717 Transcriptional regulator, LuxR family 0.35 0.25
    3 PP_4286 allantoinase no 0.25
    4 PP_3415 Transcriptional regulator, LacI family 0.26 0.24
    5 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase no 0.24
    6 PP_0850 Dual-specificity RNA methyltransferase RlmN no 0.23
    7 PP_4483 histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit no 0.23
    8 PP_3722 Alanine racemase no 0.22
    9 PP_0281 Amino acid ABC transporter, permease protein no 0.21
    10 PP_5502 ribosome modulation factor 0.52 0.20
    11 PP_3503 Sigma-54 dependent transcriptional regulator no 0.20
    12 PP_3881 putative Phage terminase, large subunit no 0.20
    13 PP_4261 cation-transporting P-type ATPase 0.15 0.20
    14 PP_4505 Sensor histidine kinase 0.37 0.20
    15 PP_3209 Isoxanthopterin deaminase no 0.20
    16 PP_2556 Chromate transporter no 0.20
    17 PP_4250 cytochrome c oxidase subunit I, cbb3-type 0.27 0.20
    18 PP_5327 putative phosphate ABC transporter, permease subunit 0.32 0.20
    19 PP_4475 succinylglutamate desuccinylase no 0.20
    20 PP_3633 putative ArgC like N-acetyl-gamma-glutamyl-phosphate reductase no 0.20

    Or look for negative cofitness