• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PP_1840 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Superfamily II DNA/RNA helicases, SNF2 family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.31 0.21
    2 PP_1994 tRNA pseudouridine (38-40)synthase no 0.21
    3 PP_2040 Major facilitator family transporter 0.35 0.21
    4 PP_3653 Transporter, LysE family no 0.20
    5 PP_3634 putative acetyltransferase, GNAT family no 0.20
    6 PP_4977 5,10-methylenetetrahydrofolate reductase 0.76 0.20
    7 PP_5310 junction-specific ATP-dependent DNA helicase 0.16 0.19
    8 PP_5639 conserved exported protein of unknown function no 0.19
    9 PP_2878 conserved protein of unknown function no 0.19
    10 PP_0572 peptidoglycan glycosyltransferase no 0.18
    11 PP_4804 RlpA-like lipoprotein no 0.18
    12 PP_2402 putative Sensor histidine kinase 0.31 0.18
    13 PP_2302 DNA-binding, ATP-dependent protease 0.52 0.18
    14 PP_4131 NADH-quinone oxidoreductase subunit N no 0.18
    15 PP_3436 chloramphenicol-sensitive protein no 0.18
    16 PP_1672 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 0.31 0.18
    17 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.77 0.18
    18 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.15 0.18
    19 PP_3435 conserved protein of unknown function no 0.18
    20 PP_0701 fosmidomycin efflux system no 0.18

    Or look for negative cofitness