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Cofit
Protein
Homologs
Top cofit genes for PP_1824 from
Pseudomonas putida KT2440
Smr domain protein
SEED: Smr domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_2210
LysR family transcriptional regulator
no
0.29
2
PP
_2025
Exonuclease SbcD
no
0.29
3
PP
_2036
putative 4-hydroxy-tetrahydrodipicolinate synthase
no
0.24
4
PP
_5153
putative isomerase/hydrolase
no
0.24
5
PP
_4041
putative glycoside hydrolase
0.11
0.24
6
PP
_t11
tRNA-Lys
no
0.24
7
PP
_0106
cytochrome c oxidase subunit 3
no
0.24
8
PP
_2764
FMN reductase (NADPH)
no
0.23
9
PP
_2832
galactose-binding protein regulator
0.35
0.23
10
PP
_2782
Pyridoxalphosphate dependent aminotransferase, class III
no
0.23
11
PP
_2933
GSH-dependent disulfide bond oxidoreductase
no
0.23
12
PP
_4542
putative ABC transporter, ATP-binding protein/permease protein
no
0.23
13
PP
_5166
Sigma-54 dependent transcriptional regulator
no
0.22
14
PP
_3399
minor curlin subunit CsgB, nucleation component of curlin monomers
no
0.22
15
PP
_3770
conserved protein of unknown function
no
0.22
16
PP
_4312
conserved exported protein of unknown function
no
0.21
17
PP
_5598
conserved protein of unknown function
no
0.21
18
PP
_5137
ferric iron ABC transporter, ATP-binding protein
no
0.21
19
PP
_0848
donor of Fe2+ and regulator of cysteine desulfurase activity
no
0.21
20
PP
_4611
RNA polymerase sigma-70 factor, ECF subfamily
no
0.21
Or look for
negative cofitness